PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.6G238800.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 430aa    MW: 46999.3 Da    PI: 7.2549
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.6G238800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.21.3e-11109137533
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                         k  rr+++NReAAr+sR+RKka+i++Le 
  Sevir.6G238800.1.p 109 KTVRRLAQNREAARKSRLRKKAYIQQLES 137
                         5679***********************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.1E-5105180IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.864107151IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.5E-8107149No hitNo description
CDDcd147086.48E-21109161No hitNo description
SuperFamilySSF579594.9E-7109142No hitNo description
PfamPF001701.2E-8109138IPR004827Basic-leucine zipper domain
PROSITE patternPS000360112127IPR004827Basic-leucine zipper domain
PfamPF141447.0E-28189262IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
METPSPFPLL LLLLATAAAR PPSTLDIFPA WPMTMRSVHT PKEGSNLTVD NTDDSKSSSK  60
NTNNHSSDHQ LGAAAANMAS QFDQVPQQIQ HKDMATGSTP KTGKALDPKT VRRLAQNREA  120
ARKSRLRKKA YIQQLESSKL KLAQMEQDVQ RARSQGLFLG GGPGANTSSG AAMFDVGYAR  180
WLDDHGRRMA ELQGALHSHL PDGDLRAIVD DTLTHHDELF QLKVVAAKSD VSHLINGAWT  240
TPAERCFLWM GGFRPSDLLK TLLPQLDPLT EQQVVGICNL QRSSQEAEEA LSQGLEQLHQ  300
SLADTMAGGS LIDDINMSFM GQMALALGKL ANLEGFVIQA DNLRQQALHQ MHRILTVRQA  360
ARCFLAIGEY HNRLRALSSL WASRPREMLV ADEGNCGEIS VATQPSQSQF SSLLTHAVEL  420
TFSLGAREK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004978700.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotO241601e-123TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLK3YKU20.0K3YKU2_SETIT; Uncharacterized protein
STRINGSi014861m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44443670
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-138bZIP family protein